Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ClpbQ60649 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ClpbQ60649 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.54□□□□□ -0.08
ClpbQ60649 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ClpbQ60649 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.54□□□□□ -0.08
ClpbQ60649 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.54□□□□□ -0.08
ClpbQ60649 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ClpbQ60649 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.54□□□□□ -0.08
ClpbQ60649 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClpbQ60649 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
ClpbQ60649 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ClpbQ60649 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.53□□□□□ -0.08
ClpbQ60649 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
ClpbQ60649 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
ClpbQ60649 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.53□□□□□ -0.08
ClpbQ60649 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.53□□□□□ -0.08
ClpbQ60649 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
ClpbQ60649 Gm5364-201ENSMUST00000216789 889 ntBASIC14.53□□□□□ -0.08
ClpbQ60649 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.53□□□□□ -0.08
ClpbQ60649 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.53□□□□□ -0.08
ClpbQ60649 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClpbQ60649 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.52□□□□□ -0.08
ClpbQ60649 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClpbQ60649 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClpbQ60649 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClpbQ60649 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClpbQ60649 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClpbQ60649 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ClpbQ60649 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.52□□□□□ -0.09
ClpbQ60649 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.52□□□□□ -0.09
ClpbQ60649 Psmb5-202ENSMUST00000227257 622 ntBASIC14.52□□□□□ -0.09
ClpbQ60649 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ClpbQ60649 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.52□□□□□ -0.09
ClpbQ60649 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ClpbQ60649 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.52□□□□□ -0.09
ClpbQ60649 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
ClpbQ60649 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClpbQ60649 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ClpbQ60649 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClpbQ60649 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms