Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp13a4Q5XF90 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atp13a4Q5XF90 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
Atp13a4Q5XF90 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atp13a4Q5XF90 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atp13a4Q5XF90 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atp13a4Q5XF90 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Gm13597-201ENSMUST00000121239 375 ntBASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atp13a4Q5XF90 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms