Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Gm2272-201ENSMUST00000194903 582 ntBASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Gm43575-201ENSMUST00000196420 516 ntBASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-4Q5R1I0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-4Q5R1I0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-4Q5R1I0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-4Q5R1I0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-4Q5R1I0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav6d-4Q5R1I0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.71□□□□□ -0.38
Trav6d-4Q5R1I0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-4Q5R1I0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav6d-4Q5R1I0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav6d-4Q5R1I0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-4Q5R1I0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Gm15427-201ENSMUST00000117288 531 ntBASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-4Q5R1I0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-4Q5R1I0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms