Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav7d-4Q5R1H9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Mir6404-201ENSMUST00000183699 94 ntBASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7d-4Q5R1H9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Gm12008-201ENSMUST00000117791 755 ntBASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7d-4Q5R1H9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav7d-4Q5R1H9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms