Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-3Q5R1E6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Gm14859-201ENSMUST00000117752 357 ntBASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav6-3Q5R1E6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav6-3Q5R1E6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-3Q5R1E6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms