Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav3-3Q5R1C3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Odf3b-204ENSMUST00000227834 930 ntBASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav3-3Q5R1C3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Gm10698-201ENSMUST00000182663 604 ntBASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav3-3Q5R1C3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms