Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trdv4Q5R1A3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Gm7862-201ENSMUST00000121461 292 ntBASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trdv4Q5R1A3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Gm7222-201ENSMUST00000117512 906 ntBASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Gm7230-201ENSMUST00000173026 815 ntBASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Gm5682-201ENSMUST00000173402 505 ntBASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Mir8098-201ENSMUST00000184011 137 ntBASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Gm5864-201ENSMUST00000202263 970 ntBASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trdv4Q5R1A3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trdv4Q5R1A3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trdv4Q5R1A3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trdv4Q5R1A3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trdv4Q5R1A3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trdv4Q5R1A3 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms