Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Gm25016-201ENSMUST00000158399 131 ntBASIC15.82■□□□□ 0.12
Vps41Q5KU39 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Vps41Q5KU39 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.82■□□□□ 0.12
Vps41Q5KU39 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps41Q5KU39 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Gm23634-201ENSMUST00000175071 91 ntBASIC15.81■□□□□ 0.12
Vps41Q5KU39 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.81■□□□□ 0.12
Vps41Q5KU39 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.81■□□□□ 0.12
Vps41Q5KU39 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.81■□□□□ 0.12
Vps41Q5KU39 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps41Q5KU39 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.8■□□□□ 0.12
Vps41Q5KU39 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Olfr129-201ENSMUST00000122318 993 ntBASIC15.8■□□□□ 0.12
Vps41Q5KU39 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.8■□□□□ 0.12
Vps41Q5KU39 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.8■□□□□ 0.12
Vps41Q5KU39 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.8■□□□□ 0.12
Vps41Q5KU39 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.8■□□□□ 0.12
Vps41Q5KU39 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps41Q5KU39 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps41Q5KU39 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps41Q5KU39 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps41Q5KU39 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps41Q5KU39 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps41Q5KU39 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Vps41Q5KU39 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps41Q5KU39 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps41Q5KU39 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Vps41Q5KU39 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Vps41Q5KU39 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms