Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Gm8410-201ENSMUST00000117225 605 ntBASIC13.94□□□□□ -0.18
Urb1Q571H0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Gm27989-201ENSMUST00000184721 107 ntBASIC13.94□□□□□ -0.18
Urb1Q571H0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.94□□□□□ -0.18
Urb1Q571H0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.94□□□□□ -0.18
Urb1Q571H0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.94□□□□□ -0.18
Urb1Q571H0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Urb1Q571H0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Haglr-201ENSMUST00000100000 2085 ntBASIC13.94□□□□□ -0.18
Urb1Q571H0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Urb1Q571H0 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.94□□□□□ -0.18
Urb1Q571H0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Urb1Q571H0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.93□□□□□ -0.18
Urb1Q571H0 Gm6912-201ENSMUST00000117218 544 ntBASIC13.93□□□□□ -0.18
Urb1Q571H0 Gm2272-201ENSMUST00000194903 582 ntBASIC13.93□□□□□ -0.18
Urb1Q571H0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.93□□□□□ -0.18
Urb1Q571H0 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.93□□□□□ -0.18
Urb1Q571H0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.93□□□□□ -0.18
Urb1Q571H0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.93□□□□□ -0.18
Urb1Q571H0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.93□□□□□ -0.18
Urb1Q571H0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Urb1Q571H0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Urb1Q571H0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.92□□□□□ -0.18
Urb1Q571H0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Urb1Q571H0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.92□□□□□ -0.18
Urb1Q571H0 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.92□□□□□ -0.18
Urb1Q571H0 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.92□□□□□ -0.18
Urb1Q571H0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.92□□□□□ -0.18
Urb1Q571H0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Urb1Q571H0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Urb1Q571H0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Urb1Q571H0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Urb1Q571H0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms