Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.98□□□□□ -0.01
Scn2bQ56A07 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Scn2bQ56A07 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Gm28659-201ENSMUST00000188013 759 ntBASIC14.97□□□□□ -0.01
Scn2bQ56A07 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.97□□□□□ -0.01
Scn2bQ56A07 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.97□□□□□ -0.01
Scn2bQ56A07 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Sybu-209ENSMUST00000228639 4113 ntBASIC14.97□□□□□ -0.01
Scn2bQ56A07 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Scn2bQ56A07 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn2bQ56A07 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms