Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Gm6973-201ENSMUST00000117080 721 ntBASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.63■□□□□ 0.41
Prpf38aQ4FK66 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.62■□□□□ 0.41
Prpf38aQ4FK66 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Prpf38aQ4FK66 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Gm13616-201ENSMUST00000120600 222 ntBASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Gm43767-201ENSMUST00000198933 381 ntBASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Gm44872-201ENSMUST00000207864 420 ntBASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf38aQ4FK66 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms