Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shank3Q4ACU6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC18.56■□□□□ 0.56
Shank3Q4ACU6 BC001981-202ENSMUST00000191393 1545 ntBASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shank3Q4ACU6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shank3Q4ACU6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shank3Q4ACU6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.54■□□□□ 0.56
Shank3Q4ACU6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Shank3Q4ACU6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms