Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ckap2Q3V1H1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Gm17968-201ENSMUST00000194902 784 ntBASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Ckap2Q3V1H1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap2Q3V1H1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap2Q3V1H1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap2Q3V1H1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.33■□□□□ 0.37
Ckap2Q3V1H1 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.33■□□□□ 0.37
Ckap2Q3V1H1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap2Q3V1H1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap2Q3V1H1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.33■□□□□ 0.37
Ckap2Q3V1H1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ckap2Q3V1H1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Thap2-203ENSMUST00000218989 527 ntBASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ckap2Q3V1H1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Gm16198-201ENSMUST00000118766 670 ntBASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.32■□□□□ 0.36
Ckap2Q3V1H1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Gm27525-201ENSMUST00000184465 107 ntBASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Gm45747-201ENSMUST00000212203 999 ntBASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ckap2Q3V1H1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms