Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc27Q3V036 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc27Q3V036 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc27Q3V036 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc27Q3V036 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc27Q3V036 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc27Q3V036 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc27Q3V036 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc27Q3V036 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc27Q3V036 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc27Q3V036 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc27Q3V036 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc27Q3V036 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Gm9172-201ENSMUST00000212092 954 ntBASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc27Q3V036 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm8825-201ENSMUST00000182565 998 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm4518-201ENSMUST00000182638 718 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm37691-201ENSMUST00000192147 2573 ntBASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc27Q3V036 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.31■□□□□ 0.68
Ccdc27Q3V036 CT030684.3-201ENSMUST00000227308 2445 ntBASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc27Q3V036 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms