Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SfswapQ3USH5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.01■□□□□ 0.47
SfswapQ3USH5 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SfswapQ3USH5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
SfswapQ3USH5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
SfswapQ3USH5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18■□□□□ 0.47
SfswapQ3USH5 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18■□□□□ 0.47
SfswapQ3USH5 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18■□□□□ 0.47
SfswapQ3USH5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SfswapQ3USH5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18■□□□□ 0.47
SfswapQ3USH5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18■□□□□ 0.47
SfswapQ3USH5 Gm43125-201ENSMUST00000201724 730 ntBASIC18■□□□□ 0.47
SfswapQ3USH5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18■□□□□ 0.47
SfswapQ3USH5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18■□□□□ 0.47
SfswapQ3USH5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SfswapQ3USH5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18■□□□□ 0.47
SfswapQ3USH5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Gm13616-201ENSMUST00000120600 222 ntBASIC17.99■□□□□ 0.47
SfswapQ3USH5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Auts2-212ENSMUST00000178555 309 ntBASIC17.99■□□□□ 0.47
SfswapQ3USH5 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.99■□□□□ 0.47
SfswapQ3USH5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SfswapQ3USH5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SfswapQ3USH5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Mir6956-201ENSMUST00000183598 62 ntBASIC17.98■□□□□ 0.47
SfswapQ3USH5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.98■□□□□ 0.47
SfswapQ3USH5 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.98■□□□□ 0.47
SfswapQ3USH5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SfswapQ3USH5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms