Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Gm18624-201ENSMUST00000220966 658 ntBASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Fam196aQ3USH1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Gm4984-201ENSMUST00000115987 360 ntBASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Gm12742-201ENSMUST00000117326 410 ntBASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Gm9522-201ENSMUST00000182394 926 ntBASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Gm43703-201ENSMUST00000200523 763 ntBASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Gm45841-201ENSMUST00000207700 164 ntBASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fam196aQ3USH1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Gm9002-201ENSMUST00000178437 499 ntBASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Gm3436-201ENSMUST00000179930 840 ntBASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fam196aQ3USH1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Gm45331-201ENSMUST00000209868 554 ntBASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fam196aQ3USH1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms