Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1brtQ3UNC9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1brtQ3UNC9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cks1brtQ3UNC9 Gm26524-201ENSMUST00000192339 390 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms