Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Gm37519-201ENSMUST00000191687 2210 ntBASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 AC166574.6-201ENSMUST00000227889 1806 ntBASIC7.92□□□□□ -1.14
Ush2AQ2QI47 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 AC131743.5-201ENSMUST00000220775 1618 ntBASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 AC154680.1-201ENSMUST00000224376 859 ntBASIC7.91□□□□□ -1.14
Ush2AQ2QI47 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Gm12208-201ENSMUST00000122004 163 ntBASIC7.91□□□□□ -1.14
Ush2AQ2QI47 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Ush2AQ2QI47 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm6916-202ENSMUST00000205523 195 ntBASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm10109-202ENSMUST00000206890 1211 ntBASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm29705-201ENSMUST00000212598 474 ntBASIC7.9□□□□□ -1.14
Ush2AQ2QI47 AC155237.1-201ENSMUST00000226196 1279 ntBASIC7.9□□□□□ -1.14
Ush2AQ2QI47 AC099645.1-201ENSMUST00000226476 1105 ntBASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm37008-201ENSMUST00000195712 319 ntBASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm11658-201ENSMUST00000120913 1008 ntBASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm2467-201ENSMUST00000182266 1010 ntBASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm6981-201ENSMUST00000182467 1008 ntBASIC7.9□□□□□ -1.14
Ush2AQ2QI47 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Ush2AQ2QI47 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Ush2AQ2QI47 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Ush2AQ2QI47 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Ush2AQ2QI47 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC7.9□□□□□ -1.15
Ush2AQ2QI47 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC7.9□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms