Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Gm14859-201ENSMUST00000117752 357 ntBASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Mir6404-201ENSMUST00000183699 94 ntBASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.66□□□□□ -0.06
Ptchd3Q0EEE2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ptchd3Q0EEE2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ptchd3Q0EEE2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.63□□□□□ -0.07
Ptchd3Q0EEE2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms