Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.88□□□□□ -0.03
Sox4Q06831 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sox4Q06831 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox4Q06831 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox4Q06831 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox4Q06831 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Gm4995-201ENSMUST00000117247 432 ntBASIC14.87□□□□□ -0.03
Sox4Q06831 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Gm5177-201ENSMUST00000183092 997 ntBASIC14.87□□□□□ -0.03
Sox4Q06831 Mir8117-201ENSMUST00000184773 107 ntBASIC14.87□□□□□ -0.03
Sox4Q06831 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.87□□□□□ -0.03
Sox4Q06831 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.87□□□□□ -0.03
Sox4Q06831 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sox4Q06831 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sox4Q06831 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.87□□□□□ -0.03
Sox4Q06831 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sox4Q06831 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox4Q06831 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sox4Q06831 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.86□□□□□ -0.03
Sox4Q06831 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Sox4Q06831 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sox4Q06831 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Sox4Q06831 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.86□□□□□ -0.03
Sox4Q06831 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.86□□□□□ -0.03
Sox4Q06831 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.86□□□□□ -0.03
Sox4Q06831 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.86□□□□□ -0.03
Sox4Q06831 Asic1-205ENSMUST00000228185 1818 ntBASIC14.86□□□□□ -0.03
Sox4Q06831 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.86□□□□□ -0.03
Sox4Q06831 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Sox4Q06831 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sox4Q06831 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox4Q06831 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sox4Q06831 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sox4Q06831 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sox4Q06831 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.85□□□□□ -0.03
Sox4Q06831 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Sox4Q06831 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Sox4Q06831 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sox4Q06831 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sox4Q06831 Gm44492-201ENSMUST00000197012 141 ntBASIC14.85□□□□□ -0.03
Sox4Q06831 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox4Q06831 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms