Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.85■□□□□ 0.61
Col1a2Q01149 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.85■□□□□ 0.61
Col1a2Q01149 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Gm5479-201ENSMUST00000160578 435 ntBASIC18.85■□□□□ 0.61
Col1a2Q01149 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.85■□□□□ 0.61
Col1a2Q01149 Gm28630-201ENSMUST00000187806 498 ntBASIC18.85■□□□□ 0.61
Col1a2Q01149 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.85■□□□□ 0.61
Col1a2Q01149 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.85■□□□□ 0.61
Col1a2Q01149 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col1a2Q01149 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col1a2Q01149 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.84■□□□□ 0.61
Col1a2Q01149 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.84■□□□□ 0.61
Col1a2Q01149 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.84■□□□□ 0.61
Col1a2Q01149 Gm18766-201ENSMUST00000189811 808 ntBASIC18.84■□□□□ 0.61
Col1a2Q01149 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col1a2Q01149 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Col1a2Q01149 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Col1a2Q01149 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.84■□□□□ 0.61
Col1a2Q01149 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col1a2Q01149 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Col1a2Q01149 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col1a2Q01149 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.83■□□□□ 0.61
Col1a2Q01149 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col1a2Q01149 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col1a2Q01149 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.83■□□□□ 0.61
Col1a2Q01149 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col1a2Q01149 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Col1a2Q01149 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.83■□□□□ 0.61
Col1a2Q01149 Gm2451-201ENSMUST00000199447 999 ntBASIC18.83■□□□□ 0.61
Col1a2Q01149 Gm10290-201ENSMUST00000200451 999 ntBASIC18.83■□□□□ 0.61
Col1a2Q01149 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.83■□□□□ 0.61
Col1a2Q01149 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
Col1a2Q01149 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.83■□□□□ 0.61
Col1a2Q01149 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col1a2Q01149 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col1a2Q01149 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col1a2Q01149 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col1a2Q01149 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col1a2Q01149 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col1a2Q01149 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Col1a2Q01149 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col1a2Q01149 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col1a2Q01149 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col1a2Q01149 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.83■□□□□ 0.6
Col1a2Q01149 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col1a2Q01149 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col1a2Q01149 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col1a2Q01149 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.82■□□□□ 0.6
Col1a2Q01149 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Col1a2Q01149 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.82■□□□□ 0.6
Col1a2Q01149 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.82■□□□□ 0.6
Col1a2Q01149 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.82■□□□□ 0.6
Col1a2Q01149 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.82■□□□□ 0.6
Col1a2Q01149 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.82■□□□□ 0.6
Col1a2Q01149 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.82■□□□□ 0.6
Col1a2Q01149 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Col1a2Q01149 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col1a2Q01149 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms