Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm5035-201ENSMUST00000215581 927 ntBASIC21.26■□□□□ 0.99
Xrn1P97789 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Xrn1P97789 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Xrn1P97789 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Xrn1P97789 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Xrn1P97789 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Xrn1P97789 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC21.26■□□□□ 0.99
Xrn1P97789 Gm9726-201ENSMUST00000180321 678 ntBASIC21.26■□□□□ 0.99
Xrn1P97789 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC21.26■□□□□ 0.99
Xrn1P97789 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Xrn1P97789 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Xrn1P97789 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Xrn1P97789 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Xrn1P97789 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.26■□□□□ 0.99
Xrn1P97789 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Xrn1P97789 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrn1P97789 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Xrn1P97789 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrn1P97789 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrn1P97789 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Xrn1P97789 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Xrn1P97789 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC21.25■□□□□ 0.99
Xrn1P97789 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Xrn1P97789 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrn1P97789 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC21.25■□□□□ 0.99
Xrn1P97789 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC21.25■□□□□ 0.99
Xrn1P97789 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Xrn1P97789 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrn1P97789 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC21.25■□□□□ 0.99
Xrn1P97789 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Xrn1P97789 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Xrn1P97789 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Xrn1P97789 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC21.25■□□□□ 0.99
Xrn1P97789 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Xrn1P97789 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC21.25■□□□□ 0.99
Xrn1P97789 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Xrn1P97789 Gm17150-201ENSMUST00000165577 381 ntBASIC21.24■□□□□ 0.99
Xrn1P97789 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC21.24■□□□□ 0.99
Xrn1P97789 AY702102-202ENSMUST00000194651 1173 ntBASIC21.24■□□□□ 0.99
Xrn1P97789 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Xrn1P97789 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Xrn1P97789 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC21.24■□□□□ 0.99
Xrn1P97789 Gm13829-201ENSMUST00000119600 138 ntBASIC21.24■□□□□ 0.99
Xrn1P97789 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Xrn1P97789 Gm27701-201ENSMUST00000184498 110 ntBASIC21.24■□□□□ 0.99
Xrn1P97789 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Xrn1P97789 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.23■□□□□ 0.99
Xrn1P97789 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Xrn1P97789 Gm8749-201ENSMUST00000117737 331 ntBASIC21.23■□□□□ 0.99
Xrn1P97789 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC21.23■□□□□ 0.99
Xrn1P97789 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC21.23■□□□□ 0.99
Xrn1P97789 AC153962.4-201ENSMUST00000217878 242 ntBASIC21.23■□□□□ 0.99
Xrn1P97789 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Xrn1P97789 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Xrn1P97789 Gm12341-201ENSMUST00000119724 503 ntBASIC21.22■□□□□ 0.99
Xrn1P97789 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC21.22■□□□□ 0.99
Xrn1P97789 AC155286.1-201ENSMUST00000218632 448 ntBASIC21.22■□□□□ 0.99
Xrn1P97789 AC139580.1-202ENSMUST00000223574 928 ntBASIC21.22■□□□□ 0.99
Xrn1P97789 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Xrn1P97789 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Xrn1P97789 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Xrn1P97789 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Trav13-3-201ENSMUST00000117226 336 ntBASIC21.21■□□□□ 0.99
Xrn1P97789 Gm33320-201ENSMUST00000192232 530 ntBASIC21.21■□□□□ 0.99
Xrn1P97789 Gm7558-201ENSMUST00000193221 1165 ntBASIC21.21■□□□□ 0.99
Xrn1P97789 AC155252.1-201ENSMUST00000226462 1208 ntBASIC21.21■□□□□ 0.99
Xrn1P97789 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Xrn1P97789 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Xrn1P97789 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms