Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.42■□□□□ 0.06
Thumpd3P97770 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Gm6443-201ENSMUST00000203599 874 ntBASIC15.42■□□□□ 0.06
Thumpd3P97770 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.42■□□□□ 0.06
Thumpd3P97770 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.42■□□□□ 0.06
Thumpd3P97770 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Thumpd3P97770 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Thumpd3P97770 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.42■□□□□ 0.06
Thumpd3P97770 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.42■□□□□ 0.06
Thumpd3P97770 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Thumpd3P97770 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Gm18733-201ENSMUST00000173950 856 ntBASIC15.41■□□□□ 0.06
Thumpd3P97770 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.41■□□□□ 0.06
Thumpd3P97770 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.41■□□□□ 0.06
Thumpd3P97770 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.41■□□□□ 0.06
Thumpd3P97770 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.41■□□□□ 0.06
Thumpd3P97770 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Thumpd3P97770 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Thumpd3P97770 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Thumpd3P97770 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Thumpd3P97770 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.4■□□□□ 0.06
Thumpd3P97770 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.4■□□□□ 0.06
Thumpd3P97770 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Thumpd3P97770 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Thumpd3P97770 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.4■□□□□ 0.06
Thumpd3P97770 Gm43514-201ENSMUST00000198852 424 ntBASIC15.4■□□□□ 0.06
Thumpd3P97770 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.4■□□□□ 0.06
Thumpd3P97770 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.4■□□□□ 0.06
Thumpd3P97770 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.4■□□□□ 0.06
Thumpd3P97770 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Efs-202ENSMUST00000227037 2540 ntBASIC15.4■□□□□ 0.06
Thumpd3P97770 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Thumpd3P97770 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Thumpd3P97770 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Thumpd3P97770 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Thumpd3P97770 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Thumpd3P97770 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Thumpd3P97770 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Thumpd3P97770 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Thumpd3P97770 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.39■□□□□ 0.05
Thumpd3P97770 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Thumpd3P97770 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Thumpd3P97770 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.39■□□□□ 0.05
Thumpd3P97770 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.39■□□□□ 0.05
Thumpd3P97770 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.39■□□□□ 0.05
Thumpd3P97770 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms