Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Gm44344-201ENSMUST00000200287 129 ntBASIC18.92■□□□□ 0.62
Nkx2-3P97334 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.92■□□□□ 0.62
Nkx2-3P97334 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.92■□□□□ 0.62
Nkx2-3P97334 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx2-3P97334 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Gm15321-201ENSMUST00000121290 288 ntBASIC18.91■□□□□ 0.62
Nkx2-3P97334 Gm16215-201ENSMUST00000161990 637 ntBASIC18.91■□□□□ 0.62
Nkx2-3P97334 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx2-3P97334 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Syt7-204ENSMUST00000223586 1344 ntBASIC18.9■□□□□ 0.62
Nkx2-3P97334 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx2-3P97334 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx2-3P97334 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx2-3P97334 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx2-3P97334 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Nkx2-3P97334 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-3P97334 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-3P97334 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
Nkx2-3P97334 Gm14767-201ENSMUST00000121559 586 ntBASIC18.89■□□□□ 0.61
Nkx2-3P97334 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.89■□□□□ 0.61
Nkx2-3P97334 Gm9719-201ENSMUST00000162765 543 ntBASIC18.89■□□□□ 0.61
Nkx2-3P97334 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nkx2-3P97334 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nkx2-3P97334 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.89■□□□□ 0.61
Nkx2-3P97334 Gm44855-201ENSMUST00000205725 362 ntBASIC18.89■□□□□ 0.61
Nkx2-3P97334 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.89■□□□□ 0.61
Nkx2-3P97334 Gm7730-201ENSMUST00000212486 454 ntBASIC18.89■□□□□ 0.61
Nkx2-3P97334 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.89■□□□□ 0.61
Nkx2-3P97334 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.89■□□□□ 0.61
Nkx2-3P97334 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-3P97334 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-3P97334 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx2-3P97334 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Nkx2-3P97334 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms