Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.55□□□□□ -0.4
Ccl21aP84444 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccl21aP84444 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccl21aP84444 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.55□□□□□ -0.4
Ccl21aP84444 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccl21aP84444 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ccl21aP84444 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccl21aP84444 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccl21aP84444 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccl21aP84444 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccl21aP84444 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.55□□□□□ -0.4
Ccl21aP84444 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccl21aP84444 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccl21aP84444 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl21aP84444 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl21aP84444 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Ccl21aP84444 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl21aP84444 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Gm3436-201ENSMUST00000179930 840 ntBASIC12.54□□□□□ -0.4
Ccl21aP84444 Gm9522-201ENSMUST00000182394 926 ntBASIC12.54□□□□□ -0.4
Ccl21aP84444 AY702102-202ENSMUST00000194651 1173 ntBASIC12.54□□□□□ -0.4
Ccl21aP84444 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl21aP84444 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.54□□□□□ -0.4
Ccl21aP84444 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl21aP84444 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl21aP84444 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccl21aP84444 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl21aP84444 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccl21aP84444 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccl21aP84444 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccl21aP84444 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccl21aP84444 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccl21aP84444 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ccl21aP84444 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl21aP84444 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccl21aP84444 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccl21aP84444 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl21aP84444 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccl21aP84444 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl21aP84444 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccl21aP84444 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ccl21aP84444 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms