Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
SgcaP82350 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
SgcaP82350 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.72□□□□□ -0.37
SgcaP82350 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Gm26039-201ENSMUST00000158152 144 ntBASIC12.72□□□□□ -0.37
SgcaP82350 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.72□□□□□ -0.37
SgcaP82350 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Gm10052-201ENSMUST00000168019 960 ntBASIC12.72□□□□□ -0.37
SgcaP82350 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.72□□□□□ -0.37
SgcaP82350 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Gm7729-201ENSMUST00000050143 801 ntBASIC12.72□□□□□ -0.37
SgcaP82350 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SgcaP82350 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SgcaP82350 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.72□□□□□ -0.37
SgcaP82350 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
SgcaP82350 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SgcaP82350 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SgcaP82350 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SgcaP82350 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SgcaP82350 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
SgcaP82350 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SgcaP82350 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.71□□□□□ -0.37
SgcaP82350 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SgcaP82350 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.71□□□□□ -0.37
SgcaP82350 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.71□□□□□ -0.37
SgcaP82350 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SgcaP82350 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
SgcaP82350 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SgcaP82350 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcaP82350 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcaP82350 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SgcaP82350 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcaP82350 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcaP82350 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcaP82350 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SgcaP82350 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SgcaP82350 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SgcaP82350 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SgcaP82350 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SgcaP82350 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
SgcaP82350 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
SgcaP82350 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.7□□□□□ -0.38
SgcaP82350 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.7□□□□□ -0.38
SgcaP82350 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.7□□□□□ -0.38
SgcaP82350 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SgcaP82350 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SgcaP82350 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SgcaP82350 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms