Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SgcbP82349 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.5□□□□□ -0.25
SgcbP82349 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.5□□□□□ -0.25
SgcbP82349 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SgcbP82349 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.49□□□□□ -0.25
SgcbP82349 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
SgcbP82349 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.49□□□□□ -0.25
SgcbP82349 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.49□□□□□ -0.25
SgcbP82349 Gm5264-201ENSMUST00000190584 848 ntBASIC13.49□□□□□ -0.25
SgcbP82349 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.49□□□□□ -0.25
SgcbP82349 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.49□□□□□ -0.25
SgcbP82349 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SgcbP82349 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.49□□□□□ -0.25
SgcbP82349 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SgcbP82349 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SgcbP82349 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SgcbP82349 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.48□□□□□ -0.25
SgcbP82349 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Gm11779-201ENSMUST00000118541 368 ntBASIC13.48□□□□□ -0.25
SgcbP82349 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.48□□□□□ -0.25
SgcbP82349 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SgcbP82349 Dancr-204ENSMUST00000132389 2347 ntBASIC13.48□□□□□ -0.25
SgcbP82349 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
SgcbP82349 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SgcbP82349 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SgcbP82349 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.47□□□□□ -0.25
SgcbP82349 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.47□□□□□ -0.25
SgcbP82349 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
SgcbP82349 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SgcbP82349 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SgcbP82349 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.47□□□□□ -0.25
SgcbP82349 Gm11434-201ENSMUST00000122379 629 ntBASIC13.47□□□□□ -0.25
SgcbP82349 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.47□□□□□ -0.25
SgcbP82349 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.47□□□□□ -0.25
SgcbP82349 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.47□□□□□ -0.25
SgcbP82349 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms