Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Tpm1P58771 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm1P58771 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm1P58771 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.9■□□□□ 0.3
Tpm1P58771 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.9■□□□□ 0.3
Tpm1P58771 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm1P58771 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
Tpm1P58771 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm1P58771 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Gm9013-201ENSMUST00000132939 882 ntBASIC16.9■□□□□ 0.3
Tpm1P58771 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.9■□□□□ 0.3
Tpm1P58771 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.9■□□□□ 0.3
Tpm1P58771 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm1P58771 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.89■□□□□ 0.3
Tpm1P58771 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tpm1P58771 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tpm1P58771 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tpm1P58771 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tpm1P58771 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tpm1P58771 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.89■□□□□ 0.29
Tpm1P58771 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
Tpm1P58771 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Gm25406-201ENSMUST00000157599 105 ntBASIC16.89■□□□□ 0.29
Tpm1P58771 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.89■□□□□ 0.29
Tpm1P58771 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Tpm1P58771 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.89■□□□□ 0.29
Tpm1P58771 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Tpm1P58771 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm1P58771 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Tpm1P58771 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.88■□□□□ 0.29
Tpm1P58771 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Tpm1P58771 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tpm1P58771 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.88■□□□□ 0.29
Tpm1P58771 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.88■□□□□ 0.29
Tpm1P58771 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.88■□□□□ 0.29
Tpm1P58771 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Tpm1P58771 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Tpm1P58771 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tpm1P58771 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm1P58771 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tpm1P58771 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms