Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Gm18421-201ENSMUST00000204122 625 ntBASIC11.87□□□□□ -0.51
Ctdsp1P58466 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.87□□□□□ -0.51
Ctdsp1P58466 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.87□□□□□ -0.51
Ctdsp1P58466 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Ctdsp1P58466 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ctdsp1P58466 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Gm7638-201ENSMUST00000121348 967 ntBASIC11.86□□□□□ -0.51
Ctdsp1P58466 Gm6257-201ENSMUST00000163864 910 ntBASIC11.86□□□□□ -0.51
Ctdsp1P58466 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Gm44450-201ENSMUST00000199528 114 ntBASIC11.86□□□□□ -0.51
Ctdsp1P58466 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 AC163280.1-201ENSMUST00000228194 1100 ntBASIC11.86□□□□□ -0.51
Ctdsp1P58466 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.86□□□□□ -0.51
Ctdsp1P58466 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.85□□□□□ -0.51
Ctdsp1P58466 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.85□□□□□ -0.51
Ctdsp1P58466 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.85□□□□□ -0.51
Ctdsp1P58466 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ctdsp1P58466 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms