Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.94■□□□□ 0.46
Irf5P56477 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Irf5P56477 AA543401-201ENSMUST00000164248 1269 ntBASIC17.94■□□□□ 0.46
Irf5P56477 Gm17968-201ENSMUST00000194902 784 ntBASIC17.94■□□□□ 0.46
Irf5P56477 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.94■□□□□ 0.46
Irf5P56477 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Irf5P56477 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Irf5P56477 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.93■□□□□ 0.46
Irf5P56477 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.93■□□□□ 0.46
Irf5P56477 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.93■□□□□ 0.46
Irf5P56477 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.93■□□□□ 0.46
Irf5P56477 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.93■□□□□ 0.46
Irf5P56477 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Irf5P56477 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.93■□□□□ 0.46
Irf5P56477 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.93■□□□□ 0.46
Irf5P56477 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Irf5P56477 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Irf5P56477 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.93■□□□□ 0.46
Irf5P56477 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Irf5P56477 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.92■□□□□ 0.46
Irf5P56477 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Irf5P56477 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.92■□□□□ 0.46
Irf5P56477 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.92■□□□□ 0.46
Irf5P56477 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Irf5P56477 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Irf5P56477 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.92■□□□□ 0.46
Irf5P56477 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.92■□□□□ 0.46
Irf5P56477 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Irf5P56477 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Irf5P56477 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.91■□□□□ 0.46
Irf5P56477 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.91■□□□□ 0.46
Irf5P56477 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.91■□□□□ 0.46
Irf5P56477 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Irf5P56477 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms