Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh5P55284 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh5P55284 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Cdh5P55284 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh5P55284 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh5P55284 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdh5P55284 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh5P55284 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh5P55284 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh5P55284 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdh5P55284 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.78□□□□□ -0.04
Cdh5P55284 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.78□□□□□ -0.04
Cdh5P55284 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdh5P55284 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Cdh5P55284 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cdh5P55284 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cdh5P55284 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Cdh5P55284 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.78□□□□□ -0.04
Cdh5P55284 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.78□□□□□ -0.04
Cdh5P55284 Gm7506-201ENSMUST00000207758 815 ntBASIC14.78□□□□□ -0.04
Cdh5P55284 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cdh5P55284 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdh5P55284 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh5P55284 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cdh5P55284 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh5P55284 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.77□□□□□ -0.04
Cdh5P55284 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh5P55284 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh5P55284 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh5P55284 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh5P55284 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh5P55284 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh5P55284 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh5P55284 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdh5P55284 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cdh5P55284 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cdh5P55284 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.77□□□□□ -0.05
Cdh5P55284 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.77□□□□□ -0.05
Cdh5P55284 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Cdh5P55284 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdh5P55284 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
Cdh5P55284 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.76□□□□□ -0.05
Cdh5P55284 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.76□□□□□ -0.05
Cdh5P55284 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cdh5P55284 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.76□□□□□ -0.05
Cdh5P55284 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.76□□□□□ -0.05
Cdh5P55284 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Cdh5P55284 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.76□□□□□ -0.05
Cdh5P55284 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdh5P55284 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms