Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sox3P53784 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.51□□□□□ -0.09
Sox3P53784 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox3P53784 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox3P53784 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox3P53784 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox3P53784 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Sox3P53784 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.5□□□□□ -0.09
Sox3P53784 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sox3P53784 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.5□□□□□ -0.09
Sox3P53784 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.5□□□□□ -0.09
Sox3P53784 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.5□□□□□ -0.09
Sox3P53784 Gm44492-201ENSMUST00000197012 141 ntBASIC14.5□□□□□ -0.09
Sox3P53784 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.5□□□□□ -0.09
Sox3P53784 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sox3P53784 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.5□□□□□ -0.09
Sox3P53784 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Sox3P53784 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sox3P53784 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sox3P53784 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sox3P53784 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.49□□□□□ -0.09
Sox3P53784 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Sox3P53784 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sox3P53784 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Gm23547-201ENSMUST00000158210 271 ntBASIC14.49□□□□□ -0.09
Sox3P53784 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.49□□□□□ -0.09
Sox3P53784 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.49□□□□□ -0.09
Sox3P53784 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.49□□□□□ -0.09
Sox3P53784 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sox3P53784 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Sox3P53784 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.49□□□□□ -0.09
Sox3P53784 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sox3P53784 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sox3P53784 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sox3P53784 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Sox3P53784 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.48□□□□□ -0.09
Sox3P53784 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox3P53784 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.48□□□□□ -0.09
Sox3P53784 Gm27646-201ENSMUST00000183989 110 ntBASIC14.48□□□□□ -0.09
Sox3P53784 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.48□□□□□ -0.09
Sox3P53784 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.48□□□□□ -0.09
Sox3P53784 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.48□□□□□ -0.09
Sox3P53784 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.48□□□□□ -0.09
Sox3P53784 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.48□□□□□ -0.09
Sox3P53784 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Sox3P53784 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Sox3P53784 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sox3P53784 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sox3P53784 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms