Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx3P50481 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx3P50481 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lhx3P50481 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx3P50481 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Lhx3P50481 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx3P50481 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx3P50481 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.31■□□□□ 0.04
Lhx3P50481 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Lhx3P50481 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lhx3P50481 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.31■□□□□ 0.04
Lhx3P50481 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.31■□□□□ 0.04
Lhx3P50481 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Lhx3P50481 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Gm27702-201ENSMUST00000184512 56 ntBASIC15.31■□□□□ 0.04
Lhx3P50481 Gm27397-201ENSMUST00000184997 107 ntBASIC15.31■□□□□ 0.04
Lhx3P50481 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.31■□□□□ 0.04
Lhx3P50481 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Lhx3P50481 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lhx3P50481 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.31■□□□□ 0.04
Lhx3P50481 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.31■□□□□ 0.04
Lhx3P50481 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx3P50481 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.31■□□□□ 0.04
Lhx3P50481 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lhx3P50481 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.3■□□□□ 0.04
Lhx3P50481 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.3■□□□□ 0.04
Lhx3P50481 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Gm16026-204ENSMUST00000162652 683 ntBASIC15.3■□□□□ 0.04
Lhx3P50481 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.3■□□□□ 0.04
Lhx3P50481 Gm45612-201ENSMUST00000211320 160 ntBASIC15.3■□□□□ 0.04
Lhx3P50481 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lhx3P50481 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.3■□□□□ 0.04
Lhx3P50481 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx3P50481 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Lhx3P50481 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Lhx3P50481 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Lhx3P50481 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Lhx3P50481 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.29■□□□□ 0.04
Lhx3P50481 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lhx3P50481 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.29■□□□□ 0.04
Lhx3P50481 Gm2756-201ENSMUST00000195851 400 ntBASIC15.29■□□□□ 0.04
Lhx3P50481 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.29■□□□□ 0.04
Lhx3P50481 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.29■□□□□ 0.04
Lhx3P50481 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Lhx3P50481 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.29■□□□□ 0.04
Lhx3P50481 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lhx3P50481 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms