Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.23□□□□□ -0.13
Sox2P48432 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.22□□□□□ -0.13
Sox2P48432 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox2P48432 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Sox2P48432 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.22□□□□□ -0.13
Sox2P48432 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sox2P48432 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox2P48432 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.22□□□□□ -0.13
Sox2P48432 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Sox2P48432 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.22□□□□□ -0.13
Sox2P48432 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sox2P48432 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Sox2P48432 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sox2P48432 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Sox2P48432 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sox2P48432 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.21□□□□□ -0.13
Sox2P48432 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.21□□□□□ -0.13
Sox2P48432 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sox2P48432 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.21□□□□□ -0.13
Sox2P48432 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sox2P48432 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Sox2P48432 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox2P48432 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Sox2P48432 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox2P48432 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox2P48432 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox2P48432 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Sox2P48432 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox2P48432 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sox2P48432 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox2P48432 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sox2P48432 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox2P48432 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Sox2P48432 Gm14722-201ENSMUST00000118943 689 ntBASIC14.2□□□□□ -0.14
Sox2P48432 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.2□□□□□ -0.14
Sox2P48432 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.2□□□□□ -0.14
Sox2P48432 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sox2P48432 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Sox2P48432 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Sox2P48432 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sox2P48432 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms