Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Xcl1P47993 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC9.87□□□□□ -0.83
Xcl1P47993 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Xcl1P47993 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Gm10654-201ENSMUST00000098653 1633 ntBASIC9.86□□□□□ -0.83
Xcl1P47993 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Xcl1P47993 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Xcl1P47993 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Xcl1P47993 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC9.86□□□□□ -0.83
Xcl1P47993 Gm12922-201ENSMUST00000120626 809 ntBASIC9.86□□□□□ -0.83
Xcl1P47993 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC9.86□□□□□ -0.83
Xcl1P47993 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Xcl1P47993 Gm23547-201ENSMUST00000158210 271 ntBASIC9.86□□□□□ -0.83
Xcl1P47993 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
Xcl1P47993 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC9.86□□□□□ -0.83
Xcl1P47993 Wnt10b-205ENSMUST00000226846 1204 ntBASIC9.86□□□□□ -0.83
Xcl1P47993 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Xcl1P47993 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Xcl1P47993 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Xcl1P47993 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Xcl1P47993 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC9.86□□□□□ -0.83
Xcl1P47993 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Xcl1P47993 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Gfra2-202ENSMUST00000227633 1480 ntBASIC9.85□□□□□ -0.83
Xcl1P47993 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Gm8784-201ENSMUST00000222096 1435 ntBASIC9.85□□□□□ -0.83
Xcl1P47993 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC9.85□□□□□ -0.83
Xcl1P47993 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC9.85□□□□□ -0.83
Xcl1P47993 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC9.85□□□□□ -0.83
Xcl1P47993 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC9.85□□□□□ -0.83
Xcl1P47993 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Gm30437-201ENSMUST00000206086 1201 ntBASIC9.85□□□□□ -0.83
Xcl1P47993 Gm40848-201ENSMUST00000221998 324 ntBASIC9.85□□□□□ -0.83
Xcl1P47993 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Xcl1P47993 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Xcl1P47993 Actl10-202ENSMUST00000226583 1501 ntBASIC9.85□□□□□ -0.83
Xcl1P47993 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Gm9856-201ENSMUST00000217077 2578 ntBASIC9.85□□□□□ -0.83
Xcl1P47993 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Xcl1P47993 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Gm42471-201ENSMUST00000201457 1865 ntBASIC9.85□□□□□ -0.83
Xcl1P47993 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Xcl1P47993 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Xcl1P47993 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms