Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.88□□□□□ -0.19
Nkx2-2P42586 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.88□□□□□ -0.19
Nkx2-2P42586 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.88□□□□□ -0.19
Nkx2-2P42586 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-2P42586 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.87□□□□□ -0.19
Nkx2-2P42586 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-2P42586 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-2P42586 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.87□□□□□ -0.19
Nkx2-2P42586 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.87□□□□□ -0.19
Nkx2-2P42586 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.87□□□□□ -0.19
Nkx2-2P42586 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-2P42586 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.86□□□□□ -0.19
Nkx2-2P42586 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.86□□□□□ -0.19
Nkx2-2P42586 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.86□□□□□ -0.19
Nkx2-2P42586 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nkx2-2P42586 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms