Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Gm37019-201ENSMUST00000192133 2134 ntBASIC18.65■□□□□ 0.58
Nkx1-2P42580 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx1-2P42580 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Nkx1-2P42580 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkx1-2P42580 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx1-2P42580 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx1-2P42580 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC18.64■□□□□ 0.57
Nkx1-2P42580 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx1-2P42580 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx1-2P42580 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx1-2P42580 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx1-2P42580 Gm15358-201ENSMUST00000119249 520 ntBASIC18.64■□□□□ 0.57
Nkx1-2P42580 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.64■□□□□ 0.57
Nkx1-2P42580 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.64■□□□□ 0.57
Nkx1-2P42580 Gm18669-201ENSMUST00000216049 778 ntBASIC18.64■□□□□ 0.57
Nkx1-2P42580 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18.64■□□□□ 0.57
Nkx1-2P42580 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx1-2P42580 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx1-2P42580 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx1-2P42580 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx1-2P42580 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Carlr-201ENSMUST00000181515 2574 ntBASIC18.63■□□□□ 0.57
Nkx1-2P42580 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx1-2P42580 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.62■□□□□ 0.57
Nkx1-2P42580 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.62■□□□□ 0.57
Nkx1-2P42580 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nkx1-2P42580 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkx1-2P42580 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nkx1-2P42580 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx1-2P42580 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nkx1-2P42580 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx1-2P42580 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx1-2P42580 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx1-2P42580 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.61■□□□□ 0.57
Nkx1-2P42580 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nkx1-2P42580 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx1-2P42580 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nkx1-2P42580 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.61■□□□□ 0.57
Nkx1-2P42580 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms