Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.61□□□□□ -0.39
Abca1P41233 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Abca1P41233 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.61□□□□□ -0.39
Abca1P41233 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Abca1P41233 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Abca1P41233 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Gm9385-201ENSMUST00000117563 472 ntBASIC12.6□□□□□ -0.39
Abca1P41233 Gm13365-201ENSMUST00000121188 973 ntBASIC12.6□□□□□ -0.39
Abca1P41233 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.6□□□□□ -0.39
Abca1P41233 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Abca1P41233 Gm18246-201ENSMUST00000221023 728 ntBASIC12.6□□□□□ -0.39
Abca1P41233 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.6□□□□□ -0.39
Abca1P41233 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Abca1P41233 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Abca1P41233 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Abca1P41233 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Abca1P41233 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Prob1-201ENSMUST00000097619 3021 ntBASIC12.6□□□□□ -0.39
Abca1P41233 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Abca1P41233 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Abca1P41233 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.6□□□□□ -0.39
Abca1P41233 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.6□□□□□ -0.39
Abca1P41233 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.6□□□□□ -0.39
Abca1P41233 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.6□□□□□ -0.39
Abca1P41233 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.6□□□□□ -0.39
Abca1P41233 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.6□□□□□ -0.39
Abca1P41233 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Abca1P41233 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.59□□□□□ -0.39
Abca1P41233 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Abca1P41233 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Abca1P41233 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Abca1P41233 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Abca1P41233 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Abca1P41233 Dancr-204ENSMUST00000132389 2347 ntBASIC12.59□□□□□ -0.39
Abca1P41233 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.59□□□□□ -0.39
Abca1P41233 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.59□□□□□ -0.39
Abca1P41233 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Abca1P41233 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Abca1P41233 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Abca1P41233 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Abca1P41233 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Abca1P41233 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Abca1P41233 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms