Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
VhlP40338 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VhlP40338 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VhlP40338 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.45□□□□□ -0.42
VhlP40338 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VhlP40338 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
VhlP40338 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VhlP40338 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VhlP40338 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.45□□□□□ -0.42
VhlP40338 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VhlP40338 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VhlP40338 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.44□□□□□ -0.42
VhlP40338 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
VhlP40338 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.44□□□□□ -0.42
VhlP40338 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
VhlP40338 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VhlP40338 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
VhlP40338 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VhlP40338 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
VhlP40338 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.43□□□□□ -0.42
VhlP40338 Gm10013-201ENSMUST00000106074 672 ntBASIC12.43□□□□□ -0.42
VhlP40338 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.43□□□□□ -0.42
VhlP40338 Gm10231-201ENSMUST00000181584 441 ntBASIC12.43□□□□□ -0.42
VhlP40338 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.43□□□□□ -0.42
VhlP40338 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Gm10175-202ENSMUST00000208752 441 ntBASIC12.43□□□□□ -0.42
VhlP40338 Gm45328-201ENSMUST00000210942 917 ntBASIC12.43□□□□□ -0.42
VhlP40338 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.43□□□□□ -0.42
VhlP40338 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
VhlP40338 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.43□□□□□ -0.42
VhlP40338 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.43□□□□□ -0.42
VhlP40338 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
VhlP40338 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VhlP40338 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VhlP40338 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VhlP40338 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VhlP40338 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VhlP40338 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VhlP40338 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
VhlP40338 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.42□□□□□ -0.42
VhlP40338 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.42□□□□□ -0.42
VhlP40338 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VhlP40338 Gm8344-201ENSMUST00000119813 856 ntBASIC12.42□□□□□ -0.42
VhlP40338 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VhlP40338 Rprl3-201ENSMUST00000157400 290 ntBASIC12.42□□□□□ -0.42
VhlP40338 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.42□□□□□ -0.42
VhlP40338 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VhlP40338 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.42□□□□□ -0.42
VhlP40338 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VhlP40338 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.42□□□□□ -0.42
VhlP40338 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.42□□□□□ -0.42
VhlP40338 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
VhlP40338 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VhlP40338 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
VhlP40338 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VhlP40338 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
VhlP40338 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms