Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Fen1P39749 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Fen1P39749 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fen1P39749 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fen1P39749 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fen1P39749 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.27■□□□□ 0.03
Fen1P39749 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fen1P39749 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fen1P39749 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fen1P39749 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.26■□□□□ 0.03
Fen1P39749 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.26■□□□□ 0.03
Fen1P39749 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Fen1P39749 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.26■□□□□ 0.03
Fen1P39749 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Fen1P39749 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Fen1P39749 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Gm25016-201ENSMUST00000158399 131 ntBASIC15.26■□□□□ 0.03
Fen1P39749 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.26■□□□□ 0.03
Fen1P39749 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fen1P39749 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.25■□□□□ 0.03
Fen1P39749 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.25■□□□□ 0.03
Fen1P39749 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Fen1P39749 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
Fen1P39749 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Fen1P39749 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.25■□□□□ 0.03
Fen1P39749 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Fen1P39749 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.25■□□□□ 0.03
Fen1P39749 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fen1P39749 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Fen1P39749 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Fen1P39749 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.24■□□□□ 0.03
Fen1P39749 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.24■□□□□ 0.03
Fen1P39749 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.24■□□□□ 0.03
Fen1P39749 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Fen1P39749 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.24■□□□□ 0.03
Fen1P39749 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Fen1P39749 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Fen1P39749 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fen1P39749 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Fen1P39749 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fen1P39749 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fen1P39749 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fen1P39749 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms