Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col18a1P39061 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col18a1P39061 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC19.81■□□□□ 0.76
Col18a1P39061 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col18a1P39061 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Gm14723-201ENSMUST00000118686 215 ntBASIC19.8■□□□□ 0.76
Col18a1P39061 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC19.8■□□□□ 0.76
Col18a1P39061 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC19.8■□□□□ 0.76
Col18a1P39061 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Col18a1P39061 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Col18a1P39061 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Gm18222-201ENSMUST00000202416 1387 ntBASIC19.8■□□□□ 0.76
Col18a1P39061 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Col18a1P39061 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC19.8■□□□□ 0.76
Col18a1P39061 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.8■□□□□ 0.76
Col18a1P39061 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC19.8■□□□□ 0.76
Col18a1P39061 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Col18a1P39061 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Gm11814-201ENSMUST00000119515 929 ntBASIC19.8■□□□□ 0.76
Col18a1P39061 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC19.8■□□□□ 0.76
Col18a1P39061 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.8■□□□□ 0.76
Col18a1P39061 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col18a1P39061 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 AL645783.1-201ENSMUST00000221416 1832 ntBASIC19.79■□□□□ 0.76
Col18a1P39061 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Col18a1P39061 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC19.79■□□□□ 0.76
Col18a1P39061 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC19.79■□□□□ 0.76
Col18a1P39061 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC19.79■□□□□ 0.76
Col18a1P39061 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Col18a1P39061 Gm27486-201ENSMUST00000184923 80 ntBASIC19.79■□□□□ 0.76
Col18a1P39061 AC154806.6-201ENSMUST00000228192 202 ntBASIC19.79■□□□□ 0.76
Col18a1P39061 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Col18a1P39061 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Gm42690-201ENSMUST00000197921 1836 ntBASIC19.79■□□□□ 0.76
Col18a1P39061 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col18a1P39061 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col18a1P39061 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.78■□□□□ 0.76
Col18a1P39061 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Col18a1P39061 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.78■□□□□ 0.76
Col18a1P39061 Mir8109-201ENSMUST00000184375 117 ntBASIC19.78■□□□□ 0.76
Col18a1P39061 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.78■□□□□ 0.76
Col18a1P39061 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC19.78■□□□□ 0.76
Col18a1P39061 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC19.78■□□□□ 0.76
Col18a1P39061 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC19.78■□□□□ 0.76
Col18a1P39061 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Gm38241-201ENSMUST00000192641 898 ntBASIC19.78■□□□□ 0.76
Col18a1P39061 Gm7287-201ENSMUST00000205267 602 ntBASIC19.78■□□□□ 0.76
Col18a1P39061 Gm17795-201ENSMUST00000214505 757 ntBASIC19.78■□□□□ 0.76
Col18a1P39061 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC19.78■□□□□ 0.76
Col18a1P39061 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col18a1P39061 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col18a1P39061 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col18a1P39061 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col18a1P39061 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col18a1P39061 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col18a1P39061 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col18a1P39061 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col18a1P39061 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.77■□□□□ 0.76
Col18a1P39061 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col18a1P39061 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col18a1P39061 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col18a1P39061 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Col18a1P39061 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC19.77■□□□□ 0.76
Col18a1P39061 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Col18a1P39061 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC19.77■□□□□ 0.76
Col18a1P39061 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Col18a1P39061 Gm6091-201ENSMUST00000098307 165 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms