Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.07■□□□□ 0
LdlrP35951 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LdlrP35951 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.06■□□□□ 0
LdlrP35951 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LdlrP35951 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.06■□□□□ 0
LdlrP35951 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.06■□□□□ 0
LdlrP35951 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.06■□□□□ 0
LdlrP35951 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Gm6376-201ENSMUST00000209407 580 ntBASIC15.06■□□□□ 0
LdlrP35951 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.06■□□□□ 0
LdlrP35951 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.06■□□□□ 0
LdlrP35951 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LdlrP35951 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
LdlrP35951 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.05■□□□□ 0
LdlrP35951 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
LdlrP35951 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
LdlrP35951 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
LdlrP35951 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LdlrP35951 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.05■□□□□ 0
LdlrP35951 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.05■□□□□ -0
LdlrP35951 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.05■□□□□ -0
LdlrP35951 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.05■□□□□ -0
LdlrP35951 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LdlrP35951 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.05■□□□□ -0
LdlrP35951 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.05■□□□□ -0
LdlrP35951 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.05■□□□□ -0
LdlrP35951 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LdlrP35951 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LdlrP35951 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.04■□□□□ -0
LdlrP35951 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
LdlrP35951 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
LdlrP35951 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.04■□□□□ -0
LdlrP35951 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.04■□□□□ -0
LdlrP35951 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LdlrP35951 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
LdlrP35951 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.04■□□□□ -0
LdlrP35951 Mir5131-201ENSMUST00000175426 93 ntBASIC15.04■□□□□ -0
LdlrP35951 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.04■□□□□ -0
LdlrP35951 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.04■□□□□ -0
LdlrP35951 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
LdlrP35951 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
LdlrP35951 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LdlrP35951 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LdlrP35951 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms