Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc5P32043 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc5P32043 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxc5P32043 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc5P32043 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc5P32043 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.07□□□□□ -0.16
Hoxc5P32043 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc5P32043 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Hoxc5P32043 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc5P32043 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.06□□□□□ -0.16
Hoxc5P32043 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hoxc5P32043 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc5P32043 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc5P32043 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc5P32043 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.05□□□□□ -0.16
Hoxc5P32043 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc5P32043 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc5P32043 Gm14722-201ENSMUST00000118943 689 ntBASIC14.05□□□□□ -0.16
Hoxc5P32043 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxc5P32043 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.05□□□□□ -0.16
Hoxc5P32043 Gm21362-201ENSMUST00000194272 928 ntBASIC14.05□□□□□ -0.16
Hoxc5P32043 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.05□□□□□ -0.16
Hoxc5P32043 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.05□□□□□ -0.16
Hoxc5P32043 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.05□□□□□ -0.16
Hoxc5P32043 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc5P32043 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.04□□□□□ -0.16
Hoxc5P32043 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc5P32043 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.04□□□□□ -0.16
Hoxc5P32043 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc5P32043 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hoxc5P32043 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms