Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.34■□□□□ 0.37
Vcam1P29533 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Vcam1P29533 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.34■□□□□ 0.37
Vcam1P29533 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.34■□□□□ 0.37
Vcam1P29533 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vcam1P29533 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vcam1P29533 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vcam1P29533 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vcam1P29533 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vcam1P29533 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Vcam1P29533 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vcam1P29533 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Vcam1P29533 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
Vcam1P29533 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vcam1P29533 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.33■□□□□ 0.37
Vcam1P29533 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Vcam1P29533 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.33■□□□□ 0.36
Vcam1P29533 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.33■□□□□ 0.36
Vcam1P29533 Gm12151-201ENSMUST00000121374 290 ntBASIC17.33■□□□□ 0.36
Vcam1P29533 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.33■□□□□ 0.36
Vcam1P29533 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.33■□□□□ 0.36
Vcam1P29533 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vcam1P29533 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vcam1P29533 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.33■□□□□ 0.36
Vcam1P29533 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.32■□□□□ 0.36
Vcam1P29533 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.32■□□□□ 0.36
Vcam1P29533 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Vcam1P29533 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.32■□□□□ 0.36
Vcam1P29533 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vcam1P29533 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vcam1P29533 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.32■□□□□ 0.36
Vcam1P29533 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.32■□□□□ 0.36
Vcam1P29533 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.32■□□□□ 0.36
Vcam1P29533 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vcam1P29533 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Vcam1P29533 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Vcam1P29533 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Vcam1P29533 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Gm5479-201ENSMUST00000160578 435 ntBASIC17.31■□□□□ 0.36
Vcam1P29533 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.31■□□□□ 0.36
Vcam1P29533 Gm17837-201ENSMUST00000186435 985 ntBASIC17.31■□□□□ 0.36
Vcam1P29533 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Vcam1P29533 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Vcam1P29533 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Vcam1P29533 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vcam1P29533 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vcam1P29533 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vcam1P29533 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms