Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Irf8P23611 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Irf8P23611 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Irf8P23611 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Irf8P23611 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Irf8P23611 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Irf8P23611 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Irf8P23611 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Irf8P23611 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Irf8P23611 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Irf8P23611 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.3■□□□□ 0.2
Irf8P23611 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.3■□□□□ 0.2
Irf8P23611 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Irf8P23611 Gm5177-201ENSMUST00000183092 997 ntBASIC16.3■□□□□ 0.2
Irf8P23611 Mir8117-201ENSMUST00000184773 107 ntBASIC16.3■□□□□ 0.2
Irf8P23611 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.3■□□□□ 0.2
Irf8P23611 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Irf8P23611 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Irf8P23611 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.3■□□□□ 0.2
Irf8P23611 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Irf8P23611 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Irf8P23611 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Irf8P23611 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.29■□□□□ 0.2
Irf8P23611 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
Irf8P23611 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.29■□□□□ 0.2
Irf8P23611 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.29■□□□□ 0.2
Irf8P23611 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.29■□□□□ 0.2
Irf8P23611 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.29■□□□□ 0.2
Irf8P23611 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.29■□□□□ 0.2
Irf8P23611 Thap2-203ENSMUST00000218989 527 ntBASIC16.29■□□□□ 0.2
Irf8P23611 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.29■□□□□ 0.2
Irf8P23611 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.29■□□□□ 0.2
Irf8P23611 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Irf8P23611 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Irf8P23611 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.28■□□□□ 0.2
Irf8P23611 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Irf8P23611 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.28■□□□□ 0.2
Irf8P23611 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Irf8P23611 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.28■□□□□ 0.2
Irf8P23611 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.28■□□□□ 0.2
Irf8P23611 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.28■□□□□ 0.2
Irf8P23611 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Irf8P23611 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Irf8P23611 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Irf8P23611 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irf8P23611 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irf8P23611 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Irf8P23611 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Irf8P23611 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms