Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ApoeP08226 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.34□□□□□ -0.11
ApoeP08226 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.34□□□□□ -0.11
ApoeP08226 Gm18032-201ENSMUST00000222541 538 ntBASIC14.34□□□□□ -0.11
ApoeP08226 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ApoeP08226 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.34□□□□□ -0.11
ApoeP08226 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.34□□□□□ -0.11
ApoeP08226 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ApoeP08226 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.34□□□□□ -0.11
ApoeP08226 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.33□□□□□ -0.11
ApoeP08226 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ApoeP08226 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ApoeP08226 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ApoeP08226 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ApoeP08226 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ApoeP08226 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ApoeP08226 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ApoeP08226 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ApoeP08226 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.33□□□□□ -0.12
ApoeP08226 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
ApoeP08226 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.33□□□□□ -0.12
ApoeP08226 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.33□□□□□ -0.12
ApoeP08226 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.33□□□□□ -0.12
ApoeP08226 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ApoeP08226 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.33□□□□□ -0.12
ApoeP08226 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ApoeP08226 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ApoeP08226 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ApoeP08226 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ApoeP08226 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ApoeP08226 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ApoeP08226 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ApoeP08226 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
ApoeP08226 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
ApoeP08226 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ApoeP08226 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ApoeP08226 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
ApoeP08226 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.32□□□□□ -0.12
ApoeP08226 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.32□□□□□ -0.12
ApoeP08226 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.32□□□□□ -0.12
ApoeP08226 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.32□□□□□ -0.12
ApoeP08226 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.32□□□□□ -0.12
ApoeP08226 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.32□□□□□ -0.12
ApoeP08226 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ApoeP08226 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.32□□□□□ -0.12
ApoeP08226 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
ApoeP08226 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ApoeP08226 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ApoeP08226 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms