Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.33□□□□□ -0.28
P04224 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.33□□□□□ -0.28
P04224 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
P04224 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
P04224 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.32□□□□□ -0.28
P04224 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.32□□□□□ -0.28
P04224 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
P04224 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.32□□□□□ -0.28
P04224 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Gm27011-201ENSMUST00000182352 972 ntBASIC13.32□□□□□ -0.28
P04224 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.32□□□□□ -0.28
P04224 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
P04224 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
P04224 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P04224 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
P04224 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.31□□□□□ -0.28
P04224 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
P04224 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.31□□□□□ -0.28
P04224 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.31□□□□□ -0.28
P04224 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.31□□□□□ -0.28
P04224 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P04224 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
P04224 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P04224 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P04224 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.3□□□□□ -0.28
P04224 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P04224 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P04224 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.3□□□□□ -0.28
P04224 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P04224 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P04224 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.3□□□□□ -0.28
P04224 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Gm12134-201ENSMUST00000122109 520 ntBASIC13.3□□□□□ -0.28
P04224 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.3□□□□□ -0.28
P04224 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.3□□□□□ -0.28
P04224 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.3□□□□□ -0.28
P04224 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P04224 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms