Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04213 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
P04213 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.54□□□□□ -0.08
P04213 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04213 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
P04213 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04213 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
P04213 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04213 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04213 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
P04213 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
P04213 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
P04213 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
P04213 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.53□□□□□ -0.08
P04213 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.53□□□□□ -0.08
P04213 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.53□□□□□ -0.08
P04213 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
P04213 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04213 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04213 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04213 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
P04213 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04213 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
P04213 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04213 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04213 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
P04213 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04213 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.52□□□□□ -0.08
P04213 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04213 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04213 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P04213 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
P04213 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.52□□□□□ -0.09
P04213 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.52□□□□□ -0.09
P04213 Gm17971-201ENSMUST00000190239 806 ntBASIC14.52□□□□□ -0.09
P04213 Gm6376-201ENSMUST00000209407 580 ntBASIC14.52□□□□□ -0.09
P04213 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.52□□□□□ -0.09
P04213 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.52□□□□□ -0.09
P04213 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P04213 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
P04213 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
P04213 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.51□□□□□ -0.09
P04213 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
P04213 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.51□□□□□ -0.09
P04213 Gm9682-201ENSMUST00000197505 556 ntBASIC14.51□□□□□ -0.09
P04213 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.51□□□□□ -0.09
P04213 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
P04213 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
P04213 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.51□□□□□ -0.09
P04213 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P04213 Carlr-201ENSMUST00000181515 2574 ntBASIC14.51□□□□□ -0.09
P04213 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms