Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
TcraP01849 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
TcraP01849 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
TcraP01849 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TcraP01849 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.09□□□□□ -0.63
TcraP01849 Gm13474-201ENSMUST00000122466 815 ntBASIC11.09□□□□□ -0.63
TcraP01849 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.09□□□□□ -0.63
TcraP01849 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.09□□□□□ -0.63
TcraP01849 Gm2274-201ENSMUST00000184539 609 ntBASIC11.09□□□□□ -0.63
TcraP01849 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TcraP01849 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TcraP01849 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.09□□□□□ -0.63
TcraP01849 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
TcraP01849 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.08□□□□□ -0.64
TcraP01849 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TcraP01849 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
TcraP01849 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.08□□□□□ -0.64
TcraP01849 Gm37055-201ENSMUST00000191866 133 ntBASIC11.08□□□□□ -0.64
TcraP01849 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.08□□□□□ -0.64
TcraP01849 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
TcraP01849 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.08□□□□□ -0.64
TcraP01849 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TcraP01849 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
TcraP01849 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
TcraP01849 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
TcraP01849 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
TcraP01849 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms