Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Gm36967-201ENSMUST00000193814 266 ntBASIC13.72□□□□□ -0.21
DhfrP00375 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.72□□□□□ -0.21
DhfrP00375 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
DhfrP00375 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.72□□□□□ -0.21
DhfrP00375 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DhfrP00375 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DhfrP00375 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.71□□□□□ -0.21
DhfrP00375 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DhfrP00375 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DhfrP00375 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
DhfrP00375 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DhfrP00375 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
DhfrP00375 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DhfrP00375 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
DhfrP00375 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DhfrP00375 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.71□□□□□ -0.21
DhfrP00375 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
DhfrP00375 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DhfrP00375 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DhfrP00375 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
DhfrP00375 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DhfrP00375 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DhfrP00375 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
DhfrP00375 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DhfrP00375 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DhfrP00375 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
DhfrP00375 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DhfrP00375 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
DhfrP00375 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.71□□□□□ -0.22
DhfrP00375 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DhfrP00375 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
DhfrP00375 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
DhfrP00375 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DhfrP00375 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Rprl3-201ENSMUST00000157400 290 ntBASIC13.7□□□□□ -0.22
DhfrP00375 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.7□□□□□ -0.22
DhfrP00375 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.7□□□□□ -0.22
DhfrP00375 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
DhfrP00375 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
DhfrP00375 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
DhfrP00375 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.7□□□□□ -0.22
DhfrP00375 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DhfrP00375 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
DhfrP00375 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
DhfrP00375 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
DhfrP00375 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
DhfrP00375 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
DhfrP00375 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
DhfrP00375 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
DhfrP00375 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DhfrP00375 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms